Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox18P43680 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox18P43680 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox18P43680 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Sox18P43680 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox18P43680 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox18P43680 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox18P43680 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox18P43680 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sox18P43680 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.52□□□□□ -0.4
Sox18P43680 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sox18P43680 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.52□□□□□ -0.4
Sox18P43680 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.52□□□□□ -0.41
Sox18P43680 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox18P43680 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox18P43680 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Gm13505-201ENSMUST00000121666 817 ntBASIC12.52□□□□□ -0.41
Sox18P43680 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.52□□□□□ -0.41
Sox18P43680 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox18P43680 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sox18P43680 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.52□□□□□ -0.41
Sox18P43680 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox18P43680 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Gm44545-201ENSMUST00000208262 746 ntBASIC12.52□□□□□ -0.41
Sox18P43680 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.52□□□□□ -0.41
Sox18P43680 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sox18P43680 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.52□□□□□ -0.41
Sox18P43680 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.52□□□□□ -0.41
Sox18P43680 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox18P43680 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Sox18P43680 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sox18P43680 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sox18P43680 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.52□□□□□ -0.41
Sox18P43680 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.52□□□□□ -0.41
Sox18P43680 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.52□□□□□ -0.41
Sox18P43680 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox18P43680 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sox18P43680 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.51□□□□□ -0.41
Sox18P43680 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sox18P43680 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.51□□□□□ -0.41
Sox18P43680 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sox18P43680 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox18P43680 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.51□□□□□ -0.41
Sox18P43680 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sox18P43680 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.51□□□□□ -0.41
Sox18P43680 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox18P43680 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox18P43680 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sox18P43680 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sox18P43680 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sox18P43680 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sox18P43680 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sox18P43680 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Gm23200-201ENSMUST00000104379 132 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms