Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Upk2P38575 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Upk2P38575 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.36□□□□□ -0.59
Upk2P38575 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Upk2P38575 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Upk2P38575 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Upk2P38575 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.35□□□□□ -0.59
Upk2P38575 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Upk2P38575 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Gm2231-201ENSMUST00000125661 612 ntBASIC11.35□□□□□ -0.59
Upk2P38575 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.35□□□□□ -0.59
Upk2P38575 Gm8652-201ENSMUST00000181363 964 ntBASIC11.35□□□□□ -0.59
Upk2P38575 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.35□□□□□ -0.59
Upk2P38575 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.35□□□□□ -0.59
Upk2P38575 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.35□□□□□ -0.59
Upk2P38575 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.35□□□□□ -0.59
Upk2P38575 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.35□□□□□ -0.59
Upk2P38575 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Upk2P38575 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.35□□□□□ -0.59
Upk2P38575 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.35□□□□□ -0.59
Upk2P38575 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk2P38575 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.35□□□□□ -0.59
Upk2P38575 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.34□□□□□ -0.59
Upk2P38575 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Upk2P38575 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk2P38575 Gm12203-201ENSMUST00000118235 598 ntBASIC11.34□□□□□ -0.59
Upk2P38575 Gm12209-201ENSMUST00000120089 596 ntBASIC11.34□□□□□ -0.59
Upk2P38575 Gm11637-201ENSMUST00000120601 592 ntBASIC11.34□□□□□ -0.59
Upk2P38575 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.34□□□□□ -0.59
Upk2P38575 Gm27486-201ENSMUST00000184923 80 ntBASIC11.34□□□□□ -0.59
Upk2P38575 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.34□□□□□ -0.59
Upk2P38575 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.34□□□□□ -0.59
Upk2P38575 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk2P38575 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.34□□□□□ -0.59
Upk2P38575 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Upk2P38575 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Upk2P38575 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Upk2P38575 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.34□□□□□ -0.59
Upk2P38575 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Upk2P38575 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Upk2P38575 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk2P38575 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Upk2P38575 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk2P38575 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.34□□□□□ -0.59
Upk2P38575 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms