Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.13□□□□□ -0.15
Sox5P35710 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Sox5P35710 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.13□□□□□ -0.15
Sox5P35710 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.13□□□□□ -0.15
Sox5P35710 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox5P35710 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sox5P35710 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.12□□□□□ -0.15
Sox5P35710 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox5P35710 Gm15371-201ENSMUST00000117057 784 ntBASIC14.12□□□□□ -0.15
Sox5P35710 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.12□□□□□ -0.15
Sox5P35710 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Sox5P35710 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Sox5P35710 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox5P35710 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.12□□□□□ -0.15
Sox5P35710 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Sox5P35710 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sox5P35710 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.11□□□□□ -0.15
Sox5P35710 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Gm5687-201ENSMUST00000118252 640 ntBASIC14.11□□□□□ -0.15
Sox5P35710 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Sox5P35710 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.11□□□□□ -0.15
Sox5P35710 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox5P35710 Gm6983-201ENSMUST00000214912 628 ntBASIC14.11□□□□□ -0.15
Sox5P35710 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Sox5P35710 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sox5P35710 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox5P35710 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sox5P35710 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox5P35710 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox5P35710 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Sox5P35710 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.1□□□□□ -0.15
Sox5P35710 Gm12341-201ENSMUST00000119724 503 ntBASIC14.1□□□□□ -0.15
Sox5P35710 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox5P35710 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sox5P35710 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox5P35710 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.1□□□□□ -0.15
Sox5P35710 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox5P35710 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Gm44397-201ENSMUST00000195950 113 ntBASIC14.1□□□□□ -0.15
Sox5P35710 Gm44069-201ENSMUST00000204898 506 ntBASIC14.1□□□□□ -0.15
Sox5P35710 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.1□□□□□ -0.15
Sox5P35710 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox5P35710 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Gm5867-201ENSMUST00000063197 592 ntBASIC14.1□□□□□ -0.15
Sox5P35710 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sox5P35710 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Sox5P35710 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Sox5P35710 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Sox5P35710 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox5P35710 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox5P35710 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms