Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm8913-201ENSMUST00000209491 641 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.94□□□□□ -0.5
Sftpa1P35242 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.94□□□□□ -0.5
Sftpa1P35242 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sftpa1P35242 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sftpa1P35242 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.94□□□□□ -0.5
Sftpa1P35242 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sftpa1P35242 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.93□□□□□ -0.5
Sftpa1P35242 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm13611-201ENSMUST00000118269 318 ntBASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm12058-201ENSMUST00000118614 437 ntBASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm23699-201ENSMUST00000158835 135 ntBASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm27552-201ENSMUST00000183351 62 ntBASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm27844-201ENSMUST00000183613 62 ntBASIC11.93□□□□□ -0.5
Sftpa1P35242 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm44651-201ENSMUST00000207343 372 ntBASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sftpa1P35242 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sftpa1P35242 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Sftpa1P35242 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sftpa1P35242 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sftpa1P35242 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sftpa1P35242 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Sftpa1P35242 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.92□□□□□ -0.5
Sftpa1P35242 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.92□□□□□ -0.5
Sftpa1P35242 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Gm7467-201ENSMUST00000185173 652 ntBASIC11.92□□□□□ -0.5
Sftpa1P35242 Gm3508-201ENSMUST00000186012 792 ntBASIC11.92□□□□□ -0.5
Sftpa1P35242 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.92□□□□□ -0.5
Sftpa1P35242 Gzmn-202ENSMUST00000225535 989 ntBASIC11.92□□□□□ -0.5
Sftpa1P35242 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.92□□□□□ -0.5
Sftpa1P35242 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sftpa1P35242 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms