Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.12□□□□□ -0.31
Slc6a13P31649 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.12□□□□□ -0.31
Slc6a13P31649 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Slc6a13P31649 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.12□□□□□ -0.31
Slc6a13P31649 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Slc6a13P31649 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Slc6a13P31649 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Gm11425-201ENSMUST00000119608 498 ntBASIC13.12□□□□□ -0.31
Slc6a13P31649 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.12□□□□□ -0.31
Slc6a13P31649 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.12□□□□□ -0.31
Slc6a13P31649 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.12□□□□□ -0.31
Slc6a13P31649 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Slc6a13P31649 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.12□□□□□ -0.31
Slc6a13P31649 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Gm43818-201ENSMUST00000200605 466 ntBASIC13.12□□□□□ -0.31
Slc6a13P31649 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.12□□□□□ -0.31
Slc6a13P31649 Gm19163-201ENSMUST00000223313 780 ntBASIC13.12□□□□□ -0.31
Slc6a13P31649 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Gm9396-201ENSMUST00000076703 567 ntBASIC13.12□□□□□ -0.31
Slc6a13P31649 Gm10268-201ENSMUST00000085340 555 ntBASIC13.12□□□□□ -0.31
Slc6a13P31649 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Slc6a13P31649 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Slc6a13P31649 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.12□□□□□ -0.31
Slc6a13P31649 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc6a13P31649 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Slc6a13P31649 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.11□□□□□ -0.31
Slc6a13P31649 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.11□□□□□ -0.31
Slc6a13P31649 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Slc6a13P31649 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
Slc6a13P31649 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Slc6a13P31649 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.11□□□□□ -0.31
Slc6a13P31649 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Slc6a13P31649 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.11□□□□□ -0.31
Slc6a13P31649 Gm26927-201ENSMUST00000182385 965 ntBASIC13.11□□□□□ -0.31
Slc6a13P31649 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.11□□□□□ -0.31
Slc6a13P31649 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.11□□□□□ -0.31
Slc6a13P31649 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.11□□□□□ -0.31
Slc6a13P31649 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Slc6a13P31649 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Slc6a13P31649 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc6a13P31649 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms