Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp3P28862 Gm29199-201ENSMUST00000187766 775 ntBASIC13.83□□□□□ -0.2
Mmp3P28862 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.83□□□□□ -0.2
Mmp3P28862 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.83□□□□□ -0.2
Mmp3P28862 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp3P28862 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp3P28862 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp3P28862 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp3P28862 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp3P28862 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp3P28862 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp3P28862 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.83□□□□□ -0.2
Mmp3P28862 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp3P28862 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp3P28862 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp3P28862 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.83□□□□□ -0.2
Mmp3P28862 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Mmp3P28862 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.82□□□□□ -0.2
Mmp3P28862 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Mmp3P28862 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Mmp3P28862 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.82□□□□□ -0.2
Mmp3P28862 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.82□□□□□ -0.2
Mmp3P28862 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Mmp3P28862 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.82□□□□□ -0.2
Mmp3P28862 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.82□□□□□ -0.2
Mmp3P28862 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Mmp3P28862 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.82□□□□□ -0.2
Mmp3P28862 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp3P28862 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Mmp3P28862 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.81□□□□□ -0.2
Mmp3P28862 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Mmp3P28862 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Mmp3P28862 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Gm16296-201ENSMUST00000159905 325 ntBASIC13.81□□□□□ -0.2
Mmp3P28862 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.81□□□□□ -0.2
Mmp3P28862 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.81□□□□□ -0.2
Mmp3P28862 Gm44405-201ENSMUST00000198952 126 ntBASIC13.81□□□□□ -0.2
Mmp3P28862 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.81□□□□□ -0.2
Mmp3P28862 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.81□□□□□ -0.2
Mmp3P28862 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Mmp3P28862 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Mmp3P28862 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.81□□□□□ -0.2
Mmp3P28862 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp3P28862 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Mmp3P28862 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Mmp3P28862 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp3P28862 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp3P28862 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp3P28862 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.8□□□□□ -0.2
Mmp3P28862 Matn2-206ENSMUST00000228570 2798 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms