Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pde6bP23440 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.16□□□□□ -0.14
Pde6bP23440 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Mir877-201ENSMUST00000104738 85 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Gm4986-201ENSMUST00000119731 549 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Gm14381-201ENSMUST00000122105 414 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Pde6bP23440 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Gm28693-202ENSMUST00000190758 331 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Gm18056-201ENSMUST00000207670 568 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Gm18061-201ENSMUST00000208350 562 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Gm18063-201ENSMUST00000208529 568 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Gm18052-201ENSMUST00000208750 559 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Gm7046-201ENSMUST00000221351 977 ntBASIC14.16□□□□□ -0.14
Pde6bP23440 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pde6bP23440 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Pde6bP23440 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pde6bP23440 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.16□□□□□ -0.14
Pde6bP23440 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pde6bP23440 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pde6bP23440 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.15□□□□□ -0.14
Pde6bP23440 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pde6bP23440 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pde6bP23440 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.15□□□□□ -0.14
Pde6bP23440 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.15□□□□□ -0.14
Pde6bP23440 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Gm12363-201ENSMUST00000122250 668 ntBASIC14.15□□□□□ -0.14
Pde6bP23440 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.15□□□□□ -0.14
Pde6bP23440 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pde6bP23440 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.15□□□□□ -0.14
Pde6bP23440 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pde6bP23440 Gm3890-201ENSMUST00000182416 207 ntBASIC14.15□□□□□ -0.14
Pde6bP23440 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.15□□□□□ -0.14
Pde6bP23440 Gm6621-201ENSMUST00000193251 772 ntBASIC14.15□□□□□ -0.14
Pde6bP23440 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Gm18584-201ENSMUST00000203098 964 ntBASIC14.15□□□□□ -0.14
Pde6bP23440 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.15□□□□□ -0.14
Pde6bP23440 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.15□□□□□ -0.14
Pde6bP23440 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Pde6bP23440 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pde6bP23440 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.15□□□□□ -0.14
Pde6bP23440 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6bP23440 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pde6bP23440 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.14□□□□□ -0.15
Pde6bP23440 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Pde6bP23440 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.14□□□□□ -0.15
Pde6bP23440 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms