Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
BdnfP21237 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
BdnfP21237 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
BdnfP21237 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
BdnfP21237 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.45□□□□□ -0.42
BdnfP21237 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
BdnfP21237 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.45□□□□□ -0.42
BdnfP21237 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.45□□□□□ -0.42
BdnfP21237 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
BdnfP21237 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.45□□□□□ -0.42
BdnfP21237 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
BdnfP21237 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.45□□□□□ -0.42
BdnfP21237 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Gm15920-201ENSMUST00000118998 402 ntBASIC12.45□□□□□ -0.42
BdnfP21237 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
BdnfP21237 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Gm26464-201ENSMUST00000157094 305 ntBASIC12.45□□□□□ -0.42
BdnfP21237 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.45□□□□□ -0.42
BdnfP21237 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.45□□□□□ -0.42
BdnfP21237 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.45□□□□□ -0.42
BdnfP21237 Gm19078-201ENSMUST00000206311 727 ntBASIC12.45□□□□□ -0.42
BdnfP21237 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.45□□□□□ -0.42
BdnfP21237 Gm7730-201ENSMUST00000212486 454 ntBASIC12.45□□□□□ -0.42
BdnfP21237 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
BdnfP21237 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.45□□□□□ -0.42
BdnfP21237 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BdnfP21237 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
BdnfP21237 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.44□□□□□ -0.42
BdnfP21237 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.44□□□□□ -0.42
BdnfP21237 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Gm11524-201ENSMUST00000119349 807 ntBASIC12.44□□□□□ -0.42
BdnfP21237 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.44□□□□□ -0.42
BdnfP21237 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Mir7023-201ENSMUST00000185093 64 ntBASIC12.44□□□□□ -0.42
BdnfP21237 Gm42612-201ENSMUST00000197986 623 ntBASIC12.44□□□□□ -0.42
BdnfP21237 Gm43170-201ENSMUST00000199827 612 ntBASIC12.44□□□□□ -0.42
BdnfP21237 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.44□□□□□ -0.42
BdnfP21237 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.44□□□□□ -0.42
BdnfP21237 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.44□□□□□ -0.42
BdnfP21237 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
BdnfP21237 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BdnfP21237 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.44□□□□□ -0.42
BdnfP21237 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
BdnfP21237 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.43□□□□□ -0.42
BdnfP21237 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms