Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P20040 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P20040 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P20040 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P20040 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.52□□□□□ -0.57
P20040 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P20040 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P20040 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P20040 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P20040 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P20040 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.52□□□□□ -0.57
P20040 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
P20040 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P20040 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
P20040 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
P20040 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
P20040 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
P20040 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.51□□□□□ -0.57
P20040 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
P20040 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
P20040 Gm15371-201ENSMUST00000117057 784 ntBASIC11.51□□□□□ -0.57
P20040 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.51□□□□□ -0.57
P20040 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Gm5186-201ENSMUST00000218781 920 ntBASIC11.51□□□□□ -0.57
P20040 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
P20040 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Rubie-203ENSMUST00000227803 2430 ntBASIC11.51□□□□□ -0.57
P20040 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
P20040 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.51□□□□□ -0.57
P20040 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.51□□□□□ -0.57
P20040 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
P20040 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.51□□□□□ -0.57
P20040 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P20040 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
P20040 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
P20040 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
P20040 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
P20040 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.5□□□□□ -0.57
P20040 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.5□□□□□ -0.57
P20040 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Paupar-201ENSMUST00000194826 3482 ntBASIC11.5□□□□□ -0.57
P20040 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Gm9002-201ENSMUST00000178437 499 ntBASIC11.5□□□□□ -0.57
P20040 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.5□□□□□ -0.57
P20040 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.5□□□□□ -0.57
P20040 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.5□□□□□ -0.57
P20040 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Gm5161-201ENSMUST00000075243 853 ntBASIC11.5□□□□□ -0.57
P20040 Gm24447-201ENSMUST00000083977 338 ntBASIC11.5□□□□□ -0.57
P20040 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.5□□□□□ -0.57
P20040 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P20040 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
P20040 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
P20040 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.49□□□□□ -0.57
P20040 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P20040 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
P20040 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.49□□□□□ -0.57
P20040 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms