Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Gm13813-201ENSMUST00000120998 787 ntBASIC11.28□□□□□ -0.6
PtcraP0C6B2 Gm16479-201ENSMUST00000121706 932 ntBASIC11.28□□□□□ -0.6
PtcraP0C6B2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Gm26927-201ENSMUST00000182385 965 ntBASIC11.28□□□□□ -0.6
PtcraP0C6B2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.28□□□□□ -0.6
PtcraP0C6B2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.28□□□□□ -0.6
PtcraP0C6B2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PtcraP0C6B2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
PtcraP0C6B2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PtcraP0C6B2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
PtcraP0C6B2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PtcraP0C6B2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
PtcraP0C6B2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
PtcraP0C6B2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PtcraP0C6B2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.27□□□□□ -0.6
PtcraP0C6B2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PtcraP0C6B2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.27□□□□□ -0.61
PtcraP0C6B2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Gm8805-201ENSMUST00000117848 313 ntBASIC11.27□□□□□ -0.61
PtcraP0C6B2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Gm29127-201ENSMUST00000188304 517 ntBASIC11.27□□□□□ -0.61
PtcraP0C6B2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Gm4768-201ENSMUST00000206199 686 ntBASIC11.27□□□□□ -0.61
PtcraP0C6B2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Gm6091-201ENSMUST00000098307 165 ntBASIC11.27□□□□□ -0.61
PtcraP0C6B2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PtcraP0C6B2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PtcraP0C6B2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PtcraP0C6B2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PtcraP0C6B2 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.26□□□□□ -0.61
PtcraP0C6B2 Paupar-201ENSMUST00000194826 3482 ntBASIC11.26□□□□□ -0.61
PtcraP0C6B2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PtcraP0C6B2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PtcraP0C6B2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
PtcraP0C6B2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PtcraP0C6B2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PtcraP0C6B2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PtcraP0C6B2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PtcraP0C6B2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms