Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.49□□□□□ -0.09
Polr2aP08775 Gm9463-201ENSMUST00000206707 601 ntBASIC14.49□□□□□ -0.09
Polr2aP08775 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.49□□□□□ -0.09
Polr2aP08775 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.49□□□□□ -0.09
Polr2aP08775 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.49□□□□□ -0.09
Polr2aP08775 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2aP08775 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2aP08775 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Polr2aP08775 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Polr2aP08775 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Polr2aP08775 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.49□□□□□ -0.09
Polr2aP08775 Gm23218-201ENSMUST00000158124 276 ntBASIC14.49□□□□□ -0.09
Polr2aP08775 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2aP08775 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2aP08775 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.49□□□□□ -0.09
Polr2aP08775 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2aP08775 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.49□□□□□ -0.09
Polr2aP08775 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.49□□□□□ -0.09
Polr2aP08775 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.49□□□□□ -0.09
Polr2aP08775 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.49□□□□□ -0.09
Polr2aP08775 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2aP08775 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2aP08775 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2aP08775 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2aP08775 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2aP08775 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2aP08775 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.48□□□□□ -0.09
Polr2aP08775 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Polr2aP08775 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Gm22133-201ENSMUST00000102082 109 ntBASIC14.48□□□□□ -0.09
Polr2aP08775 Mir874-201ENSMUST00000104769 76 ntBASIC14.48□□□□□ -0.09
Polr2aP08775 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.48□□□□□ -0.09
Polr2aP08775 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.48□□□□□ -0.09
Polr2aP08775 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Polr2aP08775 Gm43520-201ENSMUST00000197996 164 ntBASIC14.48□□□□□ -0.09
Polr2aP08775 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.48□□□□□ -0.09
Polr2aP08775 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.48□□□□□ -0.09
Polr2aP08775 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Polr2aP08775 Gm10288-201ENSMUST00000084614 537 ntBASIC14.48□□□□□ -0.09
Polr2aP08775 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Polr2aP08775 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Polr2aP08775 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Polr2aP08775 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.48□□□□□ -0.09
Polr2aP08775 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2aP08775 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.47□□□□□ -0.09
Polr2aP08775 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Polr2aP08775 Gm13047-201ENSMUST00000117116 815 ntBASIC14.47□□□□□ -0.09
Polr2aP08775 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Polr2aP08775 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.47□□□□□ -0.09
Polr2aP08775 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.47□□□□□ -0.09
Polr2aP08775 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Polr2aP08775 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Polr2aP08775 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.47□□□□□ -0.09
Polr2aP08775 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Polr2aP08775 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Polr2aP08775 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Polr2aP08775 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2aP08775 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Polr2aP08775 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms