Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.75□□□□□ -0.37
Hoxa4P06798 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.75□□□□□ -0.37
Hoxa4P06798 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.75□□□□□ -0.37
Hoxa4P06798 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Acot6-202ENSMUST00000222921 3622 ntBASIC12.75□□□□□ -0.37
Hoxa4P06798 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Hoxa4P06798 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa4P06798 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Hoxa4P06798 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxa4P06798 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.74□□□□□ -0.37
Hoxa4P06798 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.74□□□□□ -0.37
Hoxa4P06798 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hoxa4P06798 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.74□□□□□ -0.37
Hoxa4P06798 Gm13392-201ENSMUST00000117708 150 ntBASIC12.74□□□□□ -0.37
Hoxa4P06798 Gm13492-201ENSMUST00000119772 665 ntBASIC12.74□□□□□ -0.37
Hoxa4P06798 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.74□□□□□ -0.37
Hoxa4P06798 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
Hoxa4P06798 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.74□□□□□ -0.37
Hoxa4P06798 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.74□□□□□ -0.37
Hoxa4P06798 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Hoxa4P06798 Gm38002-201ENSMUST00000193255 180 ntBASIC12.74□□□□□ -0.37
Hoxa4P06798 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.74□□□□□ -0.37
Hoxa4P06798 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxa4P06798 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxa4P06798 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.74□□□□□ -0.37
Hoxa4P06798 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.74□□□□□ -0.37
Hoxa4P06798 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Hoxa4P06798 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa4P06798 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa4P06798 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.73□□□□□ -0.37
Hoxa4P06798 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxa4P06798 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxa4P06798 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa4P06798 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Gm17420-201ENSMUST00000164753 153 ntBASIC12.73□□□□□ -0.37
Hoxa4P06798 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa4P06798 Gm18054-201ENSMUST00000207539 555 ntBASIC12.73□□□□□ -0.37
Hoxa4P06798 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxa4P06798 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hoxa4P06798 Gm10478-201ENSMUST00000084451 396 ntBASIC12.73□□□□□ -0.37
Hoxa4P06798 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa4P06798 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxa4P06798 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa4P06798 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa4P06798 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxa4P06798 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa4P06798 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa4P06798 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa4P06798 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.72□□□□□ -0.37
Hoxa4P06798 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa4P06798 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms