Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
P06344 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
P06344 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
P06344 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.55□□□□□ -0.56
P06344 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.55□□□□□ -0.56
P06344 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Gm26185-201ENSMUST00000157692 266 ntBASIC11.55□□□□□ -0.56
P06344 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.55□□□□□ -0.56
P06344 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
P06344 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Gm27572-201ENSMUST00000183702 255 ntBASIC11.55□□□□□ -0.56
P06344 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.55□□□□□ -0.56
P06344 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.55□□□□□ -0.56
P06344 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
P06344 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
P06344 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.55□□□□□ -0.56
P06344 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
P06344 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.55□□□□□ -0.56
P06344 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.55□□□□□ -0.56
P06344 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
P06344 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
P06344 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
P06344 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.54□□□□□ -0.56
P06344 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
P06344 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.54□□□□□ -0.56
P06344 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Gm25927-201ENSMUST00000175058 117 ntBASIC11.54□□□□□ -0.56
P06344 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
P06344 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.54□□□□□ -0.56
P06344 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
P06344 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.54□□□□□ -0.56
P06344 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.54□□□□□ -0.56
P06344 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.54□□□□□ -0.56
P06344 Gm42693-201ENSMUST00000196779 631 ntBASIC11.54□□□□□ -0.56
P06344 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.54□□□□□ -0.56
P06344 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
P06344 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
P06344 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.54□□□□□ -0.56
P06344 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
P06344 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.54□□□□□ -0.56
P06344 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.54□□□□□ -0.56
P06344 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P06344 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
P06344 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
P06344 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
P06344 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
P06344 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.53□□□□□ -0.56
P06344 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.53□□□□□ -0.56
P06344 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
P06344 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms