Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.36□□□□□ -0.27
CopeO89079 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Gm43575-201ENSMUST00000196420 516 ntBASIC13.36□□□□□ -0.27
CopeO89079 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.36□□□□□ -0.27
CopeO89079 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.36□□□□□ -0.27
CopeO89079 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.36□□□□□ -0.27
CopeO89079 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CopeO89079 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CopeO89079 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.36□□□□□ -0.27
CopeO89079 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.36□□□□□ -0.27
CopeO89079 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.35□□□□□ -0.27
CopeO89079 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.35□□□□□ -0.27
CopeO89079 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CopeO89079 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CopeO89079 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CopeO89079 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.35□□□□□ -0.27
CopeO89079 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.35□□□□□ -0.27
CopeO89079 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CopeO89079 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.35□□□□□ -0.27
CopeO89079 Gm9797-201ENSMUST00000052902 613 ntBASIC13.35□□□□□ -0.27
CopeO89079 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CopeO89079 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.35□□□□□ -0.27
CopeO89079 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.35□□□□□ -0.27
CopeO89079 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.35□□□□□ -0.27
CopeO89079 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopeO89079 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CopeO89079 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.34□□□□□ -0.27
CopeO89079 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CopeO89079 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
CopeO89079 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CopeO89079 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.34□□□□□ -0.27
CopeO89079 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.34□□□□□ -0.27
CopeO89079 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.34□□□□□ -0.27
CopeO89079 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CopeO89079 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CopeO89079 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.34□□□□□ -0.27
CopeO89079 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.34□□□□□ -0.27
CopeO89079 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.34□□□□□ -0.27
CopeO89079 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CopeO89079 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CopeO89079 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CopeO89079 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CopeO89079 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CopeO89079 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms