Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.22□□□□□ -0.13
Trdmt1O55055 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.22□□□□□ -0.13
Trdmt1O55055 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdmt1O55055 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.22□□□□□ -0.13
Trdmt1O55055 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trdmt1O55055 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.21□□□□□ -0.13
Trdmt1O55055 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.21□□□□□ -0.13
Trdmt1O55055 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.21□□□□□ -0.13
Trdmt1O55055 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trdmt1O55055 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.21□□□□□ -0.13
Trdmt1O55055 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trdmt1O55055 Gm28450-201ENSMUST00000187349 638 ntBASIC14.21□□□□□ -0.13
Trdmt1O55055 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.21□□□□□ -0.13
Trdmt1O55055 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.21□□□□□ -0.13
Trdmt1O55055 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Gm10312-201ENSMUST00000078515 489 ntBASIC14.21□□□□□ -0.13
Trdmt1O55055 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.21□□□□□ -0.13
Trdmt1O55055 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trdmt1O55055 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trdmt1O55055 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trdmt1O55055 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trdmt1O55055 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trdmt1O55055 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trdmt1O55055 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trdmt1O55055 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trdmt1O55055 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.2□□□□□ -0.14
Trdmt1O55055 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trdmt1O55055 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.2□□□□□ -0.14
Trdmt1O55055 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trdmt1O55055 Gm14999-201ENSMUST00000121039 624 ntBASIC14.2□□□□□ -0.14
Trdmt1O55055 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Gm24845-201ENSMUST00000158034 109 ntBASIC14.2□□□□□ -0.14
Trdmt1O55055 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.2□□□□□ -0.14
Trdmt1O55055 Gm45224-201ENSMUST00000208203 414 ntBASIC14.2□□□□□ -0.14
Trdmt1O55055 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trdmt1O55055 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.2□□□□□ -0.14
Trdmt1O55055 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.2□□□□□ -0.14
Trdmt1O55055 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trdmt1O55055 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trdmt1O55055 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trdmt1O55055 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.19□□□□□ -0.14
Trdmt1O55055 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.19□□□□□ -0.14
Trdmt1O55055 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trdmt1O55055 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.19□□□□□ -0.14
Trdmt1O55055 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.19□□□□□ -0.14
Trdmt1O55055 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.19□□□□□ -0.14
Trdmt1O55055 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.19□□□□□ -0.14
Trdmt1O55055 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.19□□□□□ -0.14
Trdmt1O55055 Gzmn-202ENSMUST00000225535 989 ntBASIC14.19□□□□□ -0.14
Trdmt1O55055 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms