Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf13O54965 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf13O54965 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf13O54965 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf13O54965 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf13O54965 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf13O54965 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rnf13O54965 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf13O54965 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf13O54965 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Rnf13O54965 Matn2-203ENSMUST00000226766 3252 ntBASIC11.75□□□□□ -0.53
Rnf13O54965 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf13O54965 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf13O54965 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf13O54965 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.74□□□□□ -0.53
Rnf13O54965 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.74□□□□□ -0.53
Rnf13O54965 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf13O54965 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf13O54965 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rnf13O54965 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rnf13O54965 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Rnf13O54965 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.74□□□□□ -0.53
Rnf13O54965 Gm15376-201ENSMUST00000122258 783 ntBASIC11.74□□□□□ -0.53
Rnf13O54965 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.74□□□□□ -0.53
Rnf13O54965 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.74□□□□□ -0.53
Rnf13O54965 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.74□□□□□ -0.53
Rnf13O54965 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf13O54965 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rnf13O54965 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.74□□□□□ -0.53
Rnf13O54965 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf13O54965 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.73□□□□□ -0.53
Rnf13O54965 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rnf13O54965 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rnf13O54965 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Rnf13O54965 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Rnf13O54965 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.73□□□□□ -0.53
Rnf13O54965 Gm26464-201ENSMUST00000157094 305 ntBASIC11.73□□□□□ -0.53
Rnf13O54965 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.73□□□□□ -0.53
Rnf13O54965 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.73□□□□□ -0.53
Rnf13O54965 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.73□□□□□ -0.53
Rnf13O54965 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf13O54965 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.73□□□□□ -0.53
Rnf13O54965 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.73□□□□□ -0.53
Rnf13O54965 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.73□□□□□ -0.53
Rnf13O54965 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.73□□□□□ -0.53
Rnf13O54965 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Gm20445-201ENSMUST00000061905 565 ntBASIC11.73□□□□□ -0.53
Rnf13O54965 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rnf13O54965 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rnf13O54965 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf13O54965 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf13O54965 Pck2-205ENSMUST00000226352 2784 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms