Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.39■□□□□ 0.05
Smarce1O54941 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.39■□□□□ 0.05
Smarce1O54941 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.39■□□□□ 0.05
Smarce1O54941 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC15.39■□□□□ 0.05
Smarce1O54941 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Smarce1O54941 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Smarce1O54941 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.38■□□□□ 0.05
Smarce1O54941 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.38■□□□□ 0.05
Smarce1O54941 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Mir686-201ENSMUST00000102174 109 ntBASIC15.38■□□□□ 0.05
Smarce1O54941 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.38■□□□□ 0.05
Smarce1O54941 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Smarce1O54941 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Smarce1O54941 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Smarce1O54941 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarce1O54941 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.37■□□□□ 0.05
Smarce1O54941 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Smarce1O54941 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Smarce1O54941 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Gm5687-201ENSMUST00000118252 640 ntBASIC15.37■□□□□ 0.05
Smarce1O54941 Gm12341-201ENSMUST00000119724 503 ntBASIC15.37■□□□□ 0.05
Smarce1O54941 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.37■□□□□ 0.05
Smarce1O54941 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Smarce1O54941 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.37■□□□□ 0.05
Smarce1O54941 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.37■□□□□ 0.05
Smarce1O54941 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Smarce1O54941 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Smarce1O54941 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Smarce1O54941 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Smarce1O54941 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.37■□□□□ 0.05
Smarce1O54941 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC15.37■□□□□ 0.05
Smarce1O54941 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarce1O54941 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.36■□□□□ 0.05
Smarce1O54941 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.36■□□□□ 0.05
Smarce1O54941 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Smarce1O54941 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Smarce1O54941 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.36■□□□□ 0.05
Smarce1O54941 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.36■□□□□ 0.05
Smarce1O54941 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.36■□□□□ 0.05
Smarce1O54941 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.36■□□□□ 0.05
Smarce1O54941 Gm28631-201ENSMUST00000190740 334 ntBASIC15.36■□□□□ 0.05
Smarce1O54941 Gm44069-201ENSMUST00000204898 506 ntBASIC15.36■□□□□ 0.05
Smarce1O54941 Gm6458-201ENSMUST00000211573 635 ntBASIC15.36■□□□□ 0.05
Smarce1O54941 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.36■□□□□ 0.05
Smarce1O54941 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms