Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.72□□□□□ -0.21
Itgb3O54890 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.72□□□□□ -0.21
Itgb3O54890 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Itgb3O54890 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.72□□□□□ -0.21
Itgb3O54890 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.72□□□□□ -0.21
Itgb3O54890 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Itgb3O54890 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.72□□□□□ -0.21
Itgb3O54890 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Itgb3O54890 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.72□□□□□ -0.21
Itgb3O54890 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Itgb3O54890 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.71□□□□□ -0.21
Itgb3O54890 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Itgb3O54890 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Itgb3O54890 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.71□□□□□ -0.21
Itgb3O54890 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.71□□□□□ -0.21
Itgb3O54890 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Itgb3O54890 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.71□□□□□ -0.21
Itgb3O54890 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.71□□□□□ -0.21
Itgb3O54890 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.71□□□□□ -0.21
Itgb3O54890 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.71□□□□□ -0.21
Itgb3O54890 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.71□□□□□ -0.21
Itgb3O54890 Gm42627-201ENSMUST00000197347 224 ntBASIC13.71□□□□□ -0.21
Itgb3O54890 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.71□□□□□ -0.21
Itgb3O54890 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.71□□□□□ -0.21
Itgb3O54890 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.71□□□□□ -0.21
Itgb3O54890 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.71□□□□□ -0.21
Itgb3O54890 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.71□□□□□ -0.21
Itgb3O54890 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Itgb3O54890 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Itgb3O54890 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Itgb3O54890 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.71□□□□□ -0.21
Itgb3O54890 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Itgb3O54890 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Itgb3O54890 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Itgb3O54890 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Itgb3O54890 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Itgb3O54890 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Itgb3O54890 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.7□□□□□ -0.22
Itgb3O54890 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Itgb3O54890 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.7□□□□□ -0.22
Itgb3O54890 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.7□□□□□ -0.22
Itgb3O54890 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Itgb3O54890 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Itgb3O54890 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.7□□□□□ -0.22
Itgb3O54890 Gm15198-201ENSMUST00000117283 177 ntBASIC13.7□□□□□ -0.22
Itgb3O54890 Gm12291-201ENSMUST00000121627 311 ntBASIC13.7□□□□□ -0.22
Itgb3O54890 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.7□□□□□ -0.22
Itgb3O54890 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.7□□□□□ -0.22
Itgb3O54890 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.7□□□□□ -0.22
Itgb3O54890 Gm8738-201ENSMUST00000172606 329 ntBASIC13.7□□□□□ -0.22
Itgb3O54890 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.7□□□□□ -0.22
Itgb3O54890 Gm23363-201ENSMUST00000175024 79 ntBASIC13.7□□□□□ -0.22
Itgb3O54890 Gm27501-201ENSMUST00000183599 107 ntBASIC13.7□□□□□ -0.22
Itgb3O54890 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.7□□□□□ -0.22
Itgb3O54890 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.7□□□□□ -0.22
Itgb3O54890 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Itgb3O54890 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms