Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Limk2O54785 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Limk2O54785 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Limk2O54785 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Limk2O54785 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.15□□□□□ -0.3
Limk2O54785 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Limk2O54785 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Limk2O54785 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.15□□□□□ -0.3
Limk2O54785 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.15□□□□□ -0.3
Limk2O54785 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Limk2O54785 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Limk2O54785 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Limk2O54785 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.14□□□□□ -0.31
Limk2O54785 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.14□□□□□ -0.31
Limk2O54785 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.14□□□□□ -0.31
Limk2O54785 Gm16479-201ENSMUST00000121706 932 ntBASIC13.14□□□□□ -0.31
Limk2O54785 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.14□□□□□ -0.31
Limk2O54785 Gm27501-201ENSMUST00000183599 107 ntBASIC13.14□□□□□ -0.31
Limk2O54785 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.14□□□□□ -0.31
Limk2O54785 Mir8109-201ENSMUST00000184375 117 ntBASIC13.14□□□□□ -0.31
Limk2O54785 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.14□□□□□ -0.31
Limk2O54785 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Limk2O54785 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.14□□□□□ -0.31
Limk2O54785 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Limk2O54785 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limk2O54785 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.13□□□□□ -0.31
Limk2O54785 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Limk2O54785 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.13□□□□□ -0.31
Limk2O54785 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Limk2O54785 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Limk2O54785 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.13□□□□□ -0.31
Limk2O54785 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Gm22018-201ENSMUST00000104357 131 ntBASIC13.13□□□□□ -0.31
Limk2O54785 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Limk2O54785 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.13□□□□□ -0.31
Limk2O54785 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.13□□□□□ -0.31
Limk2O54785 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.13□□□□□ -0.31
Limk2O54785 Gm27516-201ENSMUST00000184237 98 ntBASIC13.13□□□□□ -0.31
Limk2O54785 Gm44364-201ENSMUST00000198368 141 ntBASIC13.13□□□□□ -0.31
Limk2O54785 Gm43118-201ENSMUST00000199149 775 ntBASIC13.13□□□□□ -0.31
Limk2O54785 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.13□□□□□ -0.31
Limk2O54785 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.13□□□□□ -0.31
Limk2O54785 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Limk2O54785 Gm10146-201ENSMUST00000072739 309 ntBASIC13.13□□□□□ -0.31
Limk2O54785 Gm10268-201ENSMUST00000085340 555 ntBASIC13.13□□□□□ -0.31
Limk2O54785 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Limk2O54785 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Limk2O54785 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Limk2O54785 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms