Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.56□□□□□ -0.56
Alx4O35137 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Alx4O35137 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Alx4O35137 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.56□□□□□ -0.56
Alx4O35137 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Alx4O35137 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Alx4O35137 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.56□□□□□ -0.56
Alx4O35137 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Alx4O35137 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Alx4O35137 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Alx4O35137 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.56□□□□□ -0.56
Alx4O35137 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.56□□□□□ -0.56
Alx4O35137 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.56□□□□□ -0.56
Alx4O35137 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.56□□□□□ -0.56
Alx4O35137 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Alx4O35137 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.56□□□□□ -0.56
Alx4O35137 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.56□□□□□ -0.56
Alx4O35137 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.56□□□□□ -0.56
Alx4O35137 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.56□□□□□ -0.56
Alx4O35137 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.56□□□□□ -0.56
Alx4O35137 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.56□□□□□ -0.56
Alx4O35137 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Alx4O35137 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.55□□□□□ -0.56
Alx4O35137 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Alx4O35137 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.55□□□□□ -0.56
Alx4O35137 Gm26308-201ENSMUST00000157768 69 ntBASIC11.55□□□□□ -0.56
Alx4O35137 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.55□□□□□ -0.56
Alx4O35137 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.55□□□□□ -0.56
Alx4O35137 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Alx4O35137 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Alx4O35137 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Alx4O35137 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Alx4O35137 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Alx4O35137 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Alx4O35137 Daam2-202ENSMUST00000224595 1926 ntBASIC11.54□□□□□ -0.56
Alx4O35137 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Alx4O35137 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Alx4O35137 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.54□□□□□ -0.56
Alx4O35137 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Alx4O35137 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Alx4O35137 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Alx4O35137 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.54□□□□□ -0.56
Alx4O35137 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Alx4O35137 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Alx4O35137 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.54□□□□□ -0.56
Alx4O35137 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Alx4O35137 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Alx4O35137 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Alx4O35137 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Alx4O35137 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms