Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac1O09106 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac1O09106 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac1O09106 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac1O09106 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac1O09106 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac1O09106 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Hdac1O09106 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac1O09106 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.39■□□□□ 0.05
Hdac1O09106 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hdac1O09106 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC15.39■□□□□ 0.05
Hdac1O09106 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.39■□□□□ 0.05
Hdac1O09106 Gm16202-201ENSMUST00000117532 544 ntBASIC15.39■□□□□ 0.05
Hdac1O09106 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.39■□□□□ 0.05
Hdac1O09106 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC15.39■□□□□ 0.05
Hdac1O09106 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 AC157950.1-201ENSMUST00000217561 2168 ntBASIC15.39■□□□□ 0.05
Hdac1O09106 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.39■□□□□ 0.05
Hdac1O09106 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac1O09106 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hdac1O09106 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.38■□□□□ 0.05
Hdac1O09106 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hdac1O09106 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.38■□□□□ 0.05
Hdac1O09106 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hdac1O09106 Gm12341-201ENSMUST00000119724 503 ntBASIC15.38■□□□□ 0.05
Hdac1O09106 Gm10576-201ENSMUST00000191927 825 ntBASIC15.38■□□□□ 0.05
Hdac1O09106 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.38■□□□□ 0.05
Hdac1O09106 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.38■□□□□ 0.05
Hdac1O09106 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.38■□□□□ 0.05
Hdac1O09106 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.38■□□□□ 0.05
Hdac1O09106 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.38■□□□□ 0.05
Hdac1O09106 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
Hdac1O09106 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC15.38■□□□□ 0.05
Hdac1O09106 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac1O09106 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.37■□□□□ 0.05
Hdac1O09106 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Hdac1O09106 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.37■□□□□ 0.05
Hdac1O09106 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.37■□□□□ 0.05
Hdac1O09106 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.37■□□□□ 0.05
Hdac1O09106 Gm9630-201ENSMUST00000178304 885 ntBASIC15.37■□□□□ 0.05
Hdac1O09106 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.37■□□□□ 0.05
Hdac1O09106 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.37■□□□□ 0.05
Hdac1O09106 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.37■□□□□ 0.05
Hdac1O09106 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.37■□□□□ 0.05
Hdac1O09106 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.37■□□□□ 0.05
Hdac1O09106 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Nudt18-202ENSMUST00000228554 3619 ntBASIC15.37■□□□□ 0.05
Hdac1O09106 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms