Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gm3139J3QK78 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.9□□□□□ -0.35
Gm3139J3QK78 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.89□□□□□ -0.35
Gm3139J3QK78 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.89□□□□□ -0.35
Gm3139J3QK78 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Gm3139J3QK78 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.89□□□□□ -0.35
Gm3139J3QK78 Gm6023-201ENSMUST00000118217 606 ntBASIC12.89□□□□□ -0.35
Gm3139J3QK78 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.89□□□□□ -0.35
Gm3139J3QK78 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Gm43118-201ENSMUST00000199149 775 ntBASIC12.89□□□□□ -0.35
Gm3139J3QK78 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Mir339-201ENSMUST00000083659 96 ntBASIC12.89□□□□□ -0.35
Gm3139J3QK78 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.89□□□□□ -0.35
Gm3139J3QK78 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3139J3QK78 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.88□□□□□ -0.35
Gm3139J3QK78 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.88□□□□□ -0.35
Gm3139J3QK78 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.88□□□□□ -0.35
Gm3139J3QK78 Grk6-205ENSMUST00000224653 2976 ntBASIC12.88□□□□□ -0.35
Gm3139J3QK78 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Mir1247-201ENSMUST00000116706 82 ntBASIC12.88□□□□□ -0.35
Gm3139J3QK78 Gm11793-201ENSMUST00000120433 981 ntBASIC12.88□□□□□ -0.35
Gm3139J3QK78 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Gm24548-201ENSMUST00000158650 108 ntBASIC12.88□□□□□ -0.35
Gm3139J3QK78 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Gm8738-201ENSMUST00000172606 329 ntBASIC12.88□□□□□ -0.35
Gm3139J3QK78 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.88□□□□□ -0.35
Gm3139J3QK78 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.88□□□□□ -0.35
Gm3139J3QK78 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.88□□□□□ -0.35
Gm3139J3QK78 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3139J3QK78 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms