Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm23680-201ENSMUST00000083162 164 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Gm45094-201ENSMUST00000207013 617 ntBASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Gm8342-201ENSMUST00000209839 757 ntBASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Gm2448-201ENSMUST00000207080 559 ntBASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Gm6331-201ENSMUST00000217890 450 ntBASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col6a3E9PWQ3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Gm11957-201ENSMUST00000118304 779 ntBASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Gm9204-201ENSMUST00000212641 947 ntBASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Sybu-209ENSMUST00000228639 4113 ntBASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a3E9PWQ3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms