Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Gm12859-201ENSMUST00000117834 427 ntBASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Gm12485-201ENSMUST00000119641 291 ntBASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Gm17330-201ENSMUST00000221047 165 ntBASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Gm28043E0CXC2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13□□□□□ -0.33
Gm28043E0CXC2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Gm17435-202ENSMUST00000212699 1998 ntBASIC13□□□□□ -0.33
Gm28043E0CXC2 Gm18263-201ENSMUST00000220846 1928 ntBASIC13□□□□□ -0.33
Gm28043E0CXC2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13□□□□□ -0.33
Gm28043E0CXC2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Gm11434-201ENSMUST00000122379 629 ntBASIC13□□□□□ -0.33
Gm28043E0CXC2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Gm28043E0CXC2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Gm28043E0CXC2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13□□□□□ -0.33
Gm28043E0CXC2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gm28043E0CXC2 Rnf17-202ENSMUST00000223627 2077 ntBASIC13□□□□□ -0.33
Gm28043E0CXC2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Gm28043E0CXC2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm28043E0CXC2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Gm15376-201ENSMUST00000122258 783 ntBASIC12.99□□□□□ -0.33
Gm28043E0CXC2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.99□□□□□ -0.33
Gm28043E0CXC2 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 472.5 ms