Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Gm11675-201ENSMUST00000121873 832 ntBASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Gm10774-201ENSMUST00000188689 204 ntBASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 CT009713.8-202ENSMUST00000224732 385 ntBASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Gm8199-201ENSMUST00000121323 823 ntBASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Gm9387-201ENSMUST00000098624 1320 ntBASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hfm1D3Z4R1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Gm45398-201ENSMUST00000210561 165 ntBASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 CT485607.1-201ENSMUST00000216100 85 ntBASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Hfm1D3Z4R1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Gm3332-201ENSMUST00000189337 928 ntBASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms