Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Gm27701-201ENSMUST00000184498 110 ntBASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim30cD3YVI9 Matn2-203ENSMUST00000226766 3252 ntBASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Gm43371-201ENSMUST00000202838 1031 ntBASIC14.17□□□□□ -0.14
Trim30cD3YVI9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim30cD3YVI9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Gm28911-201ENSMUST00000188837 117 ntBASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms