Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.63□□□□□ -0.39
Clip3B9EHT4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Gm9899-201ENSMUST00000065519 555 ntBASIC12.63□□□□□ -0.39
Clip3B9EHT4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Gm10012-201ENSMUST00000078252 192 ntBASIC12.63□□□□□ -0.39
Clip3B9EHT4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clip3B9EHT4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.62□□□□□ -0.39
Clip3B9EHT4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.62□□□□□ -0.39
Clip3B9EHT4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.62□□□□□ -0.39
Clip3B9EHT4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Gm40466-201ENSMUST00000212174 422 ntBASIC12.62□□□□□ -0.39
Clip3B9EHT4 Gm8598-201ENSMUST00000221184 836 ntBASIC12.62□□□□□ -0.39
Clip3B9EHT4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.62□□□□□ -0.39
Clip3B9EHT4 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.62□□□□□ -0.39
Clip3B9EHT4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.62□□□□□ -0.39
Clip3B9EHT4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip3B9EHT4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.61□□□□□ -0.39
Clip3B9EHT4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Gm27731-201ENSMUST00000185192 107 ntBASIC12.61□□□□□ -0.39
Clip3B9EHT4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.61□□□□□ -0.39
Clip3B9EHT4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.61□□□□□ -0.39
Clip3B9EHT4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.61□□□□□ -0.39
Clip3B9EHT4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.61□□□□□ -0.39
Clip3B9EHT4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms