Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Gm14350-201ENSMUST00000116642 640 ntBASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Gm16202-201ENSMUST00000117532 544 ntBASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Gm14660-201ENSMUST00000119809 575 ntBASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Gm19931-201ENSMUST00000198920 368 ntBASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Gm7561-201ENSMUST00000211203 886 ntBASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.04□□□□□ -0.32
Pnldc1B2RXZ1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Gm17420-201ENSMUST00000164753 153 ntBASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Gm29649-201ENSMUST00000185649 419 ntBASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Gm45331-201ENSMUST00000209868 554 ntBASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Gm6091-201ENSMUST00000098307 165 ntBASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pnldc1B2RXZ1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Pnldc1B2RXZ1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms