Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Gm13365-201ENSMUST00000121188 973 ntBASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Gm46209-201ENSMUST00000217912 553 ntBASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm12887B1AVM1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Shd-206ENSMUST00000225145 998 ntBASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm12887B1AVM1 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms