Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.5□□□□□ -0.25
Scn1aA2APX8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Morn2-202ENSMUST00000227729 656 ntBASIC13.5□□□□□ -0.25
Scn1aA2APX8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn1aA2APX8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.49□□□□□ -0.25
Scn1aA2APX8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.49□□□□□ -0.25
Scn1aA2APX8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.49□□□□□ -0.25
Scn1aA2APX8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.49□□□□□ -0.25
Scn1aA2APX8 Gm37489-201ENSMUST00000191883 159 ntBASIC13.49□□□□□ -0.25
Scn1aA2APX8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.49□□□□□ -0.25
Scn1aA2APX8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Gm5950-201ENSMUST00000213337 772 ntBASIC13.49□□□□□ -0.25
Scn1aA2APX8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Scn1aA2APX8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.48□□□□□ -0.25
Scn1aA2APX8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.48□□□□□ -0.25
Scn1aA2APX8 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Gm21769-201ENSMUST00000211922 111 ntBASIC13.48□□□□□ -0.25
Scn1aA2APX8 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.48□□□□□ -0.25
Scn1aA2APX8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn1aA2APX8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn1aA2APX8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn1aA2APX8 Gm23270-201ENSMUST00000104055 131 ntBASIC13.47□□□□□ -0.25
Scn1aA2APX8 Gm13875-201ENSMUST00000120162 282 ntBASIC13.47□□□□□ -0.25
Scn1aA2APX8 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.47□□□□□ -0.25
Scn1aA2APX8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn1aA2APX8 Gm26083-201ENSMUST00000157904 193 ntBASIC13.47□□□□□ -0.25
Scn1aA2APX8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Scn1aA2APX8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms