Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm4804-201ENSMUST00000182234 999 ntBASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm11779-201ENSMUST00000118541 368 ntBASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm27741-201ENSMUST00000185060 237 ntBASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 AC155252.2-201ENSMUST00000226946 680 ntBASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms