Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm3809-201ENSMUST00000180973 1006 ntBASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 AC158982.1-201ENSMUST00000228377 901 ntBASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Mir6977-201ENSMUST00000184960 64 ntBASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm29741-201ENSMUST00000192667 421 ntBASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm7390-201ENSMUST00000212452 1216 ntBASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm20445-201ENSMUST00000061905 565 ntBASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms