Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.97□□□□□ -0.33
H2afb2S4R1M3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Gm9002-201ENSMUST00000178437 499 ntBASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Gm8805-201ENSMUST00000117848 313 ntBASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Gm12490-201ENSMUST00000120255 560 ntBASIC12.96□□□□□ -0.33
H2afb2S4R1M3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Gm27892-201ENSMUST00000185017 106 ntBASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.96□□□□□ -0.33
H2afb2S4R1M3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.96□□□□□ -0.34
H2afb2S4R1M3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Gm11803-201ENSMUST00000119966 444 ntBASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Gm15806-201ENSMUST00000120696 955 ntBASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Gm13123-201ENSMUST00000122173 492 ntBASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Gm8810-201ENSMUST00000172895 754 ntBASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms