Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Gm22323-201ENSMUST00000103832 109 ntBASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Mir339-201ENSMUST00000083659 96 ntBASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcb1Q9Z0H3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Gm14726-201ENSMUST00000120623 896 ntBASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Gm20482-202ENSMUST00000174729 825 ntBASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Smarcb1Q9Z0H3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms