Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tubd1Q9R1K7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tubd1Q9R1K7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubd1Q9R1K7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tubd1Q9R1K7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Mir1982-201ENSMUST00000157368 74 ntBASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Snora78-201ENSMUST00000158630 128 ntBASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Gm6222-202ENSMUST00000182143 629 ntBASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubd1Q9R1K7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Gm11964-201ENSMUST00000120982 444 ntBASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Gm18584-201ENSMUST00000203098 964 ntBASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Gm26035-201ENSMUST00000083065 308 ntBASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubd1Q9R1K7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tubd1Q9R1K7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms