Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Gm14767-201ENSMUST00000121559 586 ntBASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Gm44344-201ENSMUST00000200287 129 ntBASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Shd-206ENSMUST00000225145 998 ntBASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Mir497b-201ENSMUST00000093601 125 ntBASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d3cQ9QZS8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d3cQ9QZS8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Mir874-201ENSMUST00000104769 76 ntBASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Gm12428-201ENSMUST00000119844 727 ntBASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Sh2d3cQ9QZS8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms