Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Btrc-209ENSMUST00000224478 2194 ntBASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Gm15957-201ENSMUST00000118893 974 ntBASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.34□□□□□ -0.75
Smco4Q9JIS3 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco4Q9JIS3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms