Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube3bQ9ES34 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ube3bQ9ES34 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube3bQ9ES34 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.41■□□□□ 0.06
Ube3bQ9ES34 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube3bQ9ES34 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube3bQ9ES34 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube3bQ9ES34 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube3bQ9ES34 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube3bQ9ES34 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Gm15370-201ENSMUST00000117158 253 ntBASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Gm9368-201ENSMUST00000219348 831 ntBASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Daam2-202ENSMUST00000224595 1926 ntBASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube3bQ9ES34 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Ube3bQ9ES34 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.39■□□□□ 0.05
Ube3bQ9ES34 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Gm12241-201ENSMUST00000118330 726 ntBASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Gm14723-201ENSMUST00000118686 215 ntBASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Gm38266-201ENSMUST00000194931 421 ntBASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Olfr582-201ENSMUST00000098212 960 ntBASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.39■□□□□ 0.05
Ube3bQ9ES34 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube3bQ9ES34 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Gm4986-201ENSMUST00000119731 549 ntBASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube3bQ9ES34 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms