Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Gm9630-201ENSMUST00000178304 885 ntBASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.17□□□□□ -0.46
Hmgn3Q9DCB1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gm25287-201ENSMUST00000103846 110 ntBASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gm22918-201ENSMUST00000103855 110 ntBASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gm5566-201ENSMUST00000116118 459 ntBASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gm13015-201ENSMUST00000118674 204 ntBASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gm18049-201ENSMUST00000208909 581 ntBASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmgn3Q9DCB1 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Gm15460-201ENSMUST00000118147 391 ntBASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Gm25948-201ENSMUST00000175334 112 ntBASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Gm5425-201ENSMUST00000214125 459 ntBASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms