Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Dupd1-202ENSMUST00000224735 548 ntBASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.12□□□□□ -0.31
Sf3a3Q9D554 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Gm13385-201ENSMUST00000121089 220 ntBASIC13.11□□□□□ -0.31
Sf3a3Q9D554 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.11□□□□□ -0.31
Sf3a3Q9D554 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3a3Q9D554 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Gm17271-201ENSMUST00000165535 355 ntBASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Gm18737-201ENSMUST00000173594 937 ntBASIC13.1□□□□□ -0.31
Sf3a3Q9D554 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.1□□□□□ -0.31
Sf3a3Q9D554 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms