Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Gm9129-201ENSMUST00000218173 1689 ntBASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Gm12628-201ENSMUST00000122193 382 ntBASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Mir7677-201ENSMUST00000184226 67 ntBASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Gm6905-201ENSMUST00000205729 511 ntBASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Gm21998-201ENSMUST00000117552 1308 ntBASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Taf1dQ9D4V4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Gm23596-201ENSMUST00000104304 132 ntBASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Mir7076-201ENSMUST00000183519 74 ntBASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Gm2517-201ENSMUST00000215651 348 ntBASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Gm6867-201ENSMUST00000219165 425 ntBASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Taf1dQ9D4V4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gm42937-201ENSMUST00000197360 752 ntBASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.34■□□□□ 0.05
Taf1dQ9D4V4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms