Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.26□□□□□ -0.13
Cfap53Q9D439 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.26□□□□□ -0.13
Cfap53Q9D439 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.26□□□□□ -0.13
Cfap53Q9D439 Gm6458-201ENSMUST00000211573 635 ntBASIC14.26□□□□□ -0.13
Cfap53Q9D439 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.26□□□□□ -0.13
Cfap53Q9D439 Gm17794-201ENSMUST00000220252 955 ntBASIC14.26□□□□□ -0.13
Cfap53Q9D439 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.26□□□□□ -0.13
Cfap53Q9D439 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.26□□□□□ -0.13
Cfap53Q9D439 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap53Q9D439 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.25□□□□□ -0.13
Cfap53Q9D439 Gm12490-201ENSMUST00000120255 560 ntBASIC14.25□□□□□ -0.13
Cfap53Q9D439 Gm12138-201ENSMUST00000122180 951 ntBASIC14.25□□□□□ -0.13
Cfap53Q9D439 Gm9002-201ENSMUST00000178437 499 ntBASIC14.25□□□□□ -0.13
Cfap53Q9D439 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.25□□□□□ -0.13
Cfap53Q9D439 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.25□□□□□ -0.13
Cfap53Q9D439 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cfap53Q9D439 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Mir1894-201ENSMUST00000122802 81 ntBASIC14.24□□□□□ -0.13
Cfap53Q9D439 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfap53Q9D439 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cfap53Q9D439 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms