Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd1Q9D0E3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd1Q9D0E3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd1Q9D0E3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Gm12857-201ENSMUST00000117678 592 ntBASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Gm11578-201ENSMUST00000118530 459 ntBASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Gm12712-201ENSMUST00000120676 801 ntBASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Gm42433-201ENSMUST00000196806 940 ntBASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Gm4157-201ENSMUST00000211647 679 ntBASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd1Q9D0E3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Gng5-ps-201ENSMUST00000120931 205 ntBASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Rprl1-201ENSMUST00000158050 327 ntBASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Gm6855-201ENSMUST00000206307 790 ntBASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd1Q9D0E3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd1Q9D0E3 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms