Protein–RNA interactions for Protein: Q9CUH1

4930553M12Rik, RIKEN cDNA 4930553M12 gene (Fragment), mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930553M12RikQ9CUH1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Gm4271-201ENSMUST00000174444 973 ntBASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Gm28693-202ENSMUST00000190758 331 ntBASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.19□□□□□ -0.46
4930553M12RikQ9CUH1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Gm6266-201ENSMUST00000203844 806 ntBASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Gm6458-201ENSMUST00000211573 635 ntBASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
4930553M12RikQ9CUH1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Gm13369-201ENSMUST00000119442 987 ntBASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Gm15824-201ENSMUST00000119516 955 ntBASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Gm13829-201ENSMUST00000119600 138 ntBASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Gm2231-201ENSMUST00000125661 612 ntBASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
4930553M12RikQ9CUH1 Gm5186-201ENSMUST00000218781 920 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms