Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb1Q9CQ70 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.64□□□□□ -0.71
H2afb1Q9CQ70 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb1Q9CQ70 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb1Q9CQ70 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb1Q9CQ70 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Gm44069-201ENSMUST00000204898 506 ntBASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.63□□□□□ -0.71
H2afb1Q9CQ70 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Gm14350-201ENSMUST00000116642 640 ntBASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Gm6152-201ENSMUST00000151704 340 ntBASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Mir6977-201ENSMUST00000184960 64 ntBASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Gm18473-201ENSMUST00000220543 868 ntBASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb1Q9CQ70 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms