Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Mir686-201ENSMUST00000102174 109 ntBASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim11Q99PQ2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Gm12091-201ENSMUST00000146791 830 ntBASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Gm8515-201ENSMUST00000194852 576 ntBASIC14.77□□□□□ -0.05
Trim11Q99PQ2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim11Q99PQ2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Gm38671-201ENSMUST00000200573 130 ntBASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.76□□□□□ -0.05
Trim11Q99PQ2 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms