Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Gm27306-201ENSMUST00000183970 107 ntBASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Gm5161-201ENSMUST00000075243 853 ntBASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Gm24447-201ENSMUST00000083977 338 ntBASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim8Q99PJ2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.74□□□□□ -0.37
Trim8Q99PJ2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim8Q99PJ2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms