Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Mir181d-201ENSMUST00000102383 72 ntBASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gm12291-201ENSMUST00000121627 311 ntBASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gm22877-201ENSMUST00000175451 105 ntBASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdh23Q99PF4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.83□□□□□ -0.35
Cdh23Q99PF4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdh23Q99PF4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdh23Q99PF4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.83□□□□□ -0.35
Cdh23Q99PF4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gm14219-201ENSMUST00000120414 288 ntBASIC12.83□□□□□ -0.36
Cdh23Q99PF4 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gm12314-201ENSMUST00000118104 538 ntBASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gm4726-201ENSMUST00000135604 736 ntBASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gm6019-201ENSMUST00000148369 736 ntBASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gm9230-201ENSMUST00000188228 532 ntBASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gm42937-201ENSMUST00000197360 752 ntBASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdh23Q99PF4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms