Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.4□□□□□ -0.58
Scrt1Q99M85 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Gm17330-201ENSMUST00000221047 165 ntBASIC11.4□□□□□ -0.58
Scrt1Q99M85 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.4□□□□□ -0.58
Scrt1Q99M85 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scrt1Q99M85 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scrt1Q99M85 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scrt1Q99M85 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scrt1Q99M85 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scrt1Q99M85 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scrt1Q99M85 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scrt1Q99M85 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scrt1Q99M85 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.39□□□□□ -0.59
Scrt1Q99M85 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.39□□□□□ -0.59
Scrt1Q99M85 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Gm15770-201ENSMUST00000117498 584 ntBASIC11.39□□□□□ -0.59
Scrt1Q99M85 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Gm24990-201ENSMUST00000157406 323 ntBASIC11.39□□□□□ -0.59
Scrt1Q99M85 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.39□□□□□ -0.59
Scrt1Q99M85 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.39□□□□□ -0.59
Scrt1Q99M85 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scrt1Q99M85 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.38□□□□□ -0.59
Scrt1Q99M85 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.38□□□□□ -0.59
Scrt1Q99M85 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.38□□□□□ -0.59
Scrt1Q99M85 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Mospd4-201ENSMUST00000180618 576 ntBASIC11.38□□□□□ -0.59
Scrt1Q99M85 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.38□□□□□ -0.59
Scrt1Q99M85 Gm38144-201ENSMUST00000192790 465 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms