Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.69□□□□□ -0.22
Usp11Q99K46 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp11Q99K46 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Usp11Q99K46 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Usp11Q99K46 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.69□□□□□ -0.22
Usp11Q99K46 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp11Q99K46 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp11Q99K46 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp11Q99K46 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.69□□□□□ -0.22
Usp11Q99K46 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usp11Q99K46 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usp11Q99K46 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Usp11Q99K46 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Usp11Q99K46 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.68□□□□□ -0.22
Usp11Q99K46 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Usp11Q99K46 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Usp11Q99K46 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Usp11Q99K46 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Usp11Q99K46 Gm2495-201ENSMUST00000191160 466 ntBASIC13.68□□□□□ -0.22
Usp11Q99K46 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.68□□□□□ -0.22
Usp11Q99K46 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.68□□□□□ -0.22
Usp11Q99K46 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp11Q99K46 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.68□□□□□ -0.22
Usp11Q99K46 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp11Q99K46 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp11Q99K46 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Usp11Q99K46 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.67□□□□□ -0.22
Usp11Q99K46 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.67□□□□□ -0.22
Usp11Q99K46 Gm44397-201ENSMUST00000195950 113 ntBASIC13.67□□□□□ -0.22
Usp11Q99K46 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.67□□□□□ -0.22
Usp11Q99K46 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.67□□□□□ -0.22
Usp11Q99K46 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.67□□□□□ -0.22
Usp11Q99K46 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp11Q99K46 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.66□□□□□ -0.22
Usp11Q99K46 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Usp11Q99K46 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Usp11Q99K46 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.66□□□□□ -0.22
Usp11Q99K46 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.66□□□□□ -0.22
Usp11Q99K46 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.66□□□□□ -0.22
Usp11Q99K46 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.66□□□□□ -0.22
Usp11Q99K46 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.66□□□□□ -0.22
Usp11Q99K46 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp11Q99K46 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms